STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA17Spermatogenesis associated 17. (379 aa)    
Predicted Functional Partners:
RRP15
Ribosomal RNA processing 15 homolog.
      
 0.781
KCTD3
Potassium channel tetramerization domain containing 3.
      
 0.780
GPATCH2
G-patch domain containing 2.
      
 0.779
SIGLEC5
Uncharacterized protein.
     
 0.722
LOC101096188
Uncharacterized protein.
     
 0.722
MGAT1
Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase.
      
 0.718
GLIPR1L2
GLIPR1 like 2.
   
 
 0.695
MATN2
Matrilin 2.
   
 
 0.668
COL23A1
Collagen type XXIII alpha 1 chain.
    
 
 0.663
ST6GALNAC5
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5; Belongs to the glycosyltransferase 29 family.
      
 0.627
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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