STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRRM2Serine/arginine repetitive matrix 2. (2774 aa)    
Predicted Functional Partners:
CWC22
CWC22 spliceosome associated protein homolog.
    
 0.992
CDC40
Cell division cycle 40.
   
 0.992
DHX38
DEAH-box helicase 38.
    
 0.987
ENSFCAP00000031802
PWI domain-containing protein.
   
 0.975
SRRM1
Serine and arginine repetitive matrix 1.
   
 0.975
PRPF6
Pre-mRNA processing factor 6.
    
 0.973
PRPF38A
Pre-mRNA processing factor 38A.
     
 0.970
PPIL1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.963
SRRT
Serrate, RNA effector molecule.
   
 
 0.956
MFAP1
Microfibril associated protein 1.
     
 0.952
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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