Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUL3 | GLI1 | ENSFCAP00000043479 | ENSFCAP00000001923 | Cullin 3; Belongs to the cullin family. | GLI family zinc finger 1. | 0.949 |
CUL3 | GLI2 | ENSFCAP00000043479 | ENSFCAP00000054681 | Cullin 3; Belongs to the cullin family. | Uncharacterized protein. | 0.957 |
CUL3 | GLI3 | ENSFCAP00000043479 | ENSFCAP00000011124 | Cullin 3; Belongs to the cullin family. | GLI family zinc finger 3. | 0.959 |
CUL3 | GSK3B | ENSFCAP00000043479 | ENSFCAP00000043679 | Cullin 3; Belongs to the cullin family. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | 0.591 |
CUL3 | SPOP | ENSFCAP00000043479 | ENSFCAP00000002430 | Cullin 3; Belongs to the cullin family. | Speckle type BTB/POZ protein. | 0.999 |
CUL3 | SUFU | ENSFCAP00000043479 | ENSFCAP00000051933 | Cullin 3; Belongs to the cullin family. | Suppressor of fused homolog; Negative regulator in the hedgehog signaling pathway. Down- regulates GLI1-mediated transactivation of target genes. Part of a corepressor complex that acts on DNA-bound GLI1. May also act by linking GLI1 to BTRC and thereby targeting GLI1 to degradation by the proteasome. Sequesters GLI1, GLI2 and GLI3 in the cytoplasm, this effect is overcome by binding of STK36 to both SUFU and a GLI protein. Negative regulator of beta-catenin signaling. Regulates the formation of either the repressor form (GLI3R) or the activator form (GLI3A) of the full-length form of [...] | 0.953 |
GLI1 | CUL3 | ENSFCAP00000001923 | ENSFCAP00000043479 | GLI family zinc finger 1. | Cullin 3; Belongs to the cullin family. | 0.949 |
GLI1 | GLI2 | ENSFCAP00000001923 | ENSFCAP00000054681 | GLI family zinc finger 1. | Uncharacterized protein. | 0.997 |
GLI1 | GLI3 | ENSFCAP00000001923 | ENSFCAP00000011124 | GLI family zinc finger 1. | GLI family zinc finger 3. | 0.965 |
GLI1 | GSK3B | ENSFCAP00000001923 | ENSFCAP00000043679 | GLI family zinc finger 1. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | 0.614 |
GLI1 | KIF7 | ENSFCAP00000001923 | ENSFCAP00000012380 | GLI family zinc finger 1. | Kinesin family member 7; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.976 |
GLI1 | SMO | ENSFCAP00000001923 | ENSFCAP00000059936 | GLI family zinc finger 1. | Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. | 0.889 |
GLI1 | SPOP | ENSFCAP00000001923 | ENSFCAP00000002430 | GLI family zinc finger 1. | Speckle type BTB/POZ protein. | 0.978 |
GLI1 | STK36 | ENSFCAP00000001923 | ENSFCAP00000003830 | GLI family zinc finger 1. | Serine/threonine kinase 36. | 0.729 |
GLI1 | SUFU | ENSFCAP00000001923 | ENSFCAP00000051933 | GLI family zinc finger 1. | Suppressor of fused homolog; Negative regulator in the hedgehog signaling pathway. Down- regulates GLI1-mediated transactivation of target genes. Part of a corepressor complex that acts on DNA-bound GLI1. May also act by linking GLI1 to BTRC and thereby targeting GLI1 to degradation by the proteasome. Sequesters GLI1, GLI2 and GLI3 in the cytoplasm, this effect is overcome by binding of STK36 to both SUFU and a GLI protein. Negative regulator of beta-catenin signaling. Regulates the formation of either the repressor form (GLI3R) or the activator form (GLI3A) of the full-length form of [...] | 0.999 |
GLI1 | ULK3 | ENSFCAP00000001923 | ENSFCAP00000003534 | GLI family zinc finger 1. | Unc-51 like kinase 3; Belongs to the protein kinase superfamily. | 0.616 |
GLI2 | CUL3 | ENSFCAP00000054681 | ENSFCAP00000043479 | Uncharacterized protein. | Cullin 3; Belongs to the cullin family. | 0.957 |
GLI2 | GLI1 | ENSFCAP00000054681 | ENSFCAP00000001923 | Uncharacterized protein. | GLI family zinc finger 1. | 0.997 |
GLI2 | GLI3 | ENSFCAP00000054681 | ENSFCAP00000011124 | Uncharacterized protein. | GLI family zinc finger 3. | 0.956 |
GLI2 | GSK3B | ENSFCAP00000054681 | ENSFCAP00000043679 | Uncharacterized protein. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | 0.507 |
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