Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CD4H9orf131 | DDX20 | ENSFCAP00000048250 | ENSFCAP00000023711 | Uncharacterized protein. | DEAD-box helicase 20. | 0.416 |
CD4H9orf131 | ENSFCAP00000033817 | ENSFCAP00000048250 | ENSFCAP00000033817 | Uncharacterized protein. | Uncharacterized protein. | 0.418 |
CD4H9orf131 | ENSFCAP00000052370 | ENSFCAP00000048250 | ENSFCAP00000052370 | Uncharacterized protein. | Uncharacterized protein. | 0.833 |
CD4H9orf131 | FANCM | ENSFCAP00000048250 | ENSFCAP00000060976 | Uncharacterized protein. | FA complementation group M. | 0.522 |
CD4H9orf131 | MUS81 | ENSFCAP00000048250 | ENSFCAP00000012309 | Uncharacterized protein. | MUS81 structure-specific endonuclease subunit. | 0.482 |
CD4H9orf131 | POLD1 | ENSFCAP00000048250 | ENSFCAP00000000298 | Uncharacterized protein. | DNA polymerase. | 0.503 |
CD4H9orf131 | POLD2 | ENSFCAP00000048250 | ENSFCAP00000028524 | Uncharacterized protein. | DNA polymerase delta 2, accessory subunit. | 0.509 |
CD4H9orf131 | SMN | ENSFCAP00000048250 | ENSFCAP00000019138 | Uncharacterized protein. | Survival of motor neuron protein; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs. Most spliceosomal snRNPs contain a common set of Sm proteins SNRPB, SNRPD1, SNRPD2, SNRPD3, SNRPE, SNRPF and SNRPG that assemble in a heptameric protein ring on the Sm site of the small nuclear RNA to form the core snRNP. In the cytosol, the Sm proteins SNRPD1, SNRPD2, SNRPE, SNRPF and SNRPG are trapped in an inactive 6S pICln-Sm complex by the [...] | 0.498 |
CD4H9orf131 | SNRPD1 | ENSFCAP00000048250 | ENSFCAP00000029097 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. | 0.414 |
CD4H9orf131 | SNRPE | ENSFCAP00000048250 | ENSFCAP00000058490 | Uncharacterized protein. | Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. | 0.418 |
DDX20 | CD4H9orf131 | ENSFCAP00000023711 | ENSFCAP00000048250 | DEAD-box helicase 20. | Uncharacterized protein. | 0.416 |
DDX20 | ENSFCAP00000033817 | ENSFCAP00000023711 | ENSFCAP00000033817 | DEAD-box helicase 20. | Uncharacterized protein. | 0.697 |
DDX20 | ENSFCAP00000052370 | ENSFCAP00000023711 | ENSFCAP00000052370 | DEAD-box helicase 20. | Uncharacterized protein. | 0.416 |
DDX20 | SMN | ENSFCAP00000023711 | ENSFCAP00000019138 | DEAD-box helicase 20. | Survival of motor neuron protein; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs. Most spliceosomal snRNPs contain a common set of Sm proteins SNRPB, SNRPD1, SNRPD2, SNRPD3, SNRPE, SNRPF and SNRPG that assemble in a heptameric protein ring on the Sm site of the small nuclear RNA to form the core snRNP. In the cytosol, the Sm proteins SNRPD1, SNRPD2, SNRPE, SNRPF and SNRPG are trapped in an inactive 6S pICln-Sm complex by the [...] | 0.997 |
DDX20 | SNRPD1 | ENSFCAP00000023711 | ENSFCAP00000029097 | DEAD-box helicase 20. | Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. | 0.875 |
DDX20 | SNRPE | ENSFCAP00000023711 | ENSFCAP00000058490 | DEAD-box helicase 20. | Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. | 0.750 |
ENSFCAP00000033817 | CD4H9orf131 | ENSFCAP00000033817 | ENSFCAP00000048250 | Uncharacterized protein. | Uncharacterized protein. | 0.418 |
ENSFCAP00000033817 | DDX20 | ENSFCAP00000033817 | ENSFCAP00000023711 | Uncharacterized protein. | DEAD-box helicase 20. | 0.697 |
ENSFCAP00000033817 | ENSFCAP00000052370 | ENSFCAP00000033817 | ENSFCAP00000052370 | Uncharacterized protein. | Uncharacterized protein. | 0.418 |
ENSFCAP00000033817 | SMN | ENSFCAP00000033817 | ENSFCAP00000019138 | Uncharacterized protein. | Survival of motor neuron protein; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs. Most spliceosomal snRNPs contain a common set of Sm proteins SNRPB, SNRPD1, SNRPD2, SNRPD3, SNRPE, SNRPF and SNRPG that assemble in a heptameric protein ring on the Sm site of the small nuclear RNA to form the core snRNP. In the cytosol, the Sm proteins SNRPD1, SNRPD2, SNRPE, SNRPF and SNRPG are trapped in an inactive 6S pICln-Sm complex by the [...] | 0.827 |
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