STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL26A1Collagen type XXVI alpha 1 chain. (448 aa)    
Predicted Functional Partners:
COL25A1
Collagen type XXV alpha 1 chain.
     
 0.788
COL20A1
Collagen type XX alpha 1 chain.
     
 0.705
SPSB1
SplA/ryanodine receptor domain and SOCS box containing 1.
     
 0.671
COL28A1
Collagen type XXVIII alpha 1 chain.
    
 0.591
COL21A1
Collagen type XXI alpha 1 chain.
     
 0.579
COL8A2
Collagen type VIII alpha 2 chain.
     
 0.568
COL17A1
Collagen type XVII alpha 1 chain.
     
0.568
PCSK4
Proprotein convertase subtilisin/kexin type 4; Belongs to the peptidase S8 family.
    
  0.557
FURIN
Furin, paired basic amino acid cleaving enzyme; Belongs to the peptidase S8 family.
    
  0.557
COL4A6
Collagen type IV alpha 6 chain.
     
 0.555
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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