STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNCBBeta-synuclein; Belongs to the synuclein family. (231 aa)    
Predicted Functional Partners:
SNCG
Gamma-synuclein; Belongs to the synuclein family.
   
 
 0.804
NRSN2
Neurensin 2.
   
  
 0.688
M3XE16_FELCA
Stathmin; Belongs to the stathmin family.
   
 
 0.639
STMN1
Stathmin; Belongs to the stathmin family.
   
 
 0.639
FRRS1L
Ferric chelate reductase 1 like.
   
  
 0.608
STMN3
Stathmin; Belongs to the stathmin family.
   
 
 0.549
LYPD6B
LY6/PLAUR domain containing 6B.
   
  
 0.535
IYD
Iodotyrosine deiodinase.
      
 0.532
GIGYF2
GRB10 interacting GYF protein 2.
      
 0.513
PARK7
Parkinsonism associated deglycase.
      
 0.471
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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