STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN12Calpain 12; Belongs to the peptidase C2 family. (723 aa)    
Predicted Functional Partners:
CAPNS1
Calpain small subunit 1.
   
0.786
CAST
Calpastatin.
   
 0.729
CABP7
Calcium binding protein 7.
   
 
 0.725
RHBDL3
Rhomboid-related protein 3; May be involved in regulated intramembrane proteolysis and the subsequent release of functional polypeptides from their membrane anchors; Belongs to the peptidase S54 family.
   
 
 0.574
ITSN2
Intersectin 2.
   
 
 0.560
ASB3
Ankyrin repeat and SOCS box containing 3.
   
 0.504
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
 
 0.476
ANO9
Anoctamin.
   
  
 0.464
SREK1
Splicing regulatory glutamic acid and lysine rich protein 1.
      
 0.455
FAS
Uncharacterized protein.
   
  
 0.454
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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