STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSBP2Single stranded DNA binding protein 2. (376 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
   
 
 0.676
LDB2
LIM domain binding 2.
   
 
 0.630
RNF11
Ring finger protein 11.
   
    0.602
PAX3
Paired box 3.
      
 0.455
SLC4A3
Anion exchange protein.
      
 0.455
PARP8
Poly [ADP-ribose] polymerase.
      
 0.455
SIGIRR
Single Ig and TIR domain containing.
      
 0.452
LHX1
LIM homeobox 1.
    
 
 0.425
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 
 0.413
LHX3
LIM homeobox 3.
    
 
 0.404
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.