STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USE1Unconventional SNARE in the ER 1. (351 aa)    
Predicted Functional Partners:
BNIP1
BCL2 interacting protein 1.
    
 0.996
STX18
Syntaxin 18.
   
 0.996
RINT1
RAD50 interactor 1.
    
 0.959
NBAS
Neuroblastoma amplified sequence.
    
 0.956
TMPRSS5
Zw10 kinetochore protein.
    
 0.955
SEC22B
SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.
    
 0.946
NAPA
NSF attachment protein alpha.
    
 0.906
STX5
Syntaxin 5; Belongs to the syntaxin family.
    
 0.899
SNX15
Sorting nexin 15.
    
 0.870
NAPB
NSF attachment protein beta.
    
 0.870
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.