STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VTI1BVesicle transport through interaction with t-SNAREs 1B. (247 aa)    
Predicted Functional Partners:
STX8
Syntaxin 8.
   
 0.995
YKT6
YKT6 v-SNARE homolog; Belongs to the synaptobrevin family.
    
 0.992
STX16
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.986
STX7
Syntaxin 7; Belongs to the syntaxin family.
   
 0.984
VAMP8
Vesicle associated membrane protein 8.
   
 0.980
VAMP4
Vesicle associated membrane protein 4.
   
 0.978
STX6
Syntaxin 6; Belongs to the syntaxin family.
   
 0.974
STX5
Syntaxin 5; Belongs to the syntaxin family.
    
 0.950
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
    
0.944
VAMP3
Vesicle associated membrane protein 3.
   
 0.942
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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