STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BLACAT1Bladder cancer associated transcript 1. (33 aa)    
Predicted Functional Partners:
CDC5L
Cell division cycle 5 like.
   
 0.979
SF3B1
Splicing factor 3b subunit 1.
   
 
 0.977
SF3B4
Splicing factor 3b subunit 4.
   
 
 0.973
SF3B3
Splicing factor 3b subunit 3.
   
 0.971
SF3B2
Splicing factor 3b subunit 2.
   
 
 0.969
PHF5A
PHD finger protein 5A.
   
 
 0.967
SF3B5
Splicing factor 3B subunit 5; Belongs to the SF3B5 family.
   
 
 0.966
SF3B6
Splicing factor 3b subunit 6.
   
 
 0.965
PRR3
Proline rich 3.
   
 
 0.902
SF1
Splicing factor 1.
   
 
 0.902
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.