STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5orf34Chromosome 5 open reading frame 34. (660 aa)    
Predicted Functional Partners:
COPS8
COP9 signalosome subunit 8.
      
 0.723
CCDC124
Coiled-coil domain containing 124.
      
 0.697
HAAO
3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate; Belongs to the 3-HAO family.
      
 0.512
TMEM267
Uncharacterized protein.
      
 0.489
C8orf82
Chromosome 8 open reading frame 82.
      
 0.479
NIM1K
NIM1 serine/threonine protein kinase; Belongs to the protein kinase superfamily.
      
 0.455
SLC15A5
Solute carrier family 15 member 5.
      
 0.440
SPATC1
Spermatogenesis and centriole associated 1.
      
 0.439
LRRC24
Leucine rich repeat containing 24.
      
 0.437
TMEM160
Uncharacterized protein.
      
 0.437
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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