STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAPLNPapilin, proteoglycan like sulfated glycoprotein. (1380 aa)    
Predicted Functional Partners:
PRPF3
Pre-mRNA processing factor 3.
      
 0.713
R3HCC1
R3H domain and coiled-coil containing 1.
      
 0.642
FAM78A
Family with sequence similarity 78 member A.
    
 0.633
FAM78B
Family with sequence similarity 78 member B.
    
 0.633
WIPF1
WAS/WASL interacting protein family member 1.
      
 0.619
GDF10
Growth differentiation factor 10.
    
 
 0.565
MOCS1
Molybdenum cofactor synthesis 1.
    
 
 0.562
MAP3K14
Mitogen-activated protein kinase kinase kinase 14.
      
 0.553
FSCN1
Fascin actin-bundling protein 1.
    
 
 0.541
SERPINF2
Serpin family F member 2; Belongs to the serpin family.
    
 0.504
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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