STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105261327Left-right determination factor. (367 aa)    
Predicted Functional Partners:
NODAL
Nodal growth differentiation factor.
   
 
 0.958
TGFB3
Transforming growth factor beta; Belongs to the TGF-beta family.
     
 0.926
TGFB1
Transforming growth factor beta; Belongs to the TGF-beta family.
     
 0.924
TDGF1
Teratocarcinoma-derived growth factor 1.
   
 0.566
CDK12
Cyclin dependent kinase 12.
      
 0.529
ACVR1B
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.491
FOXH1
Forkhead box H1.
     
 0.481
POU5F1
POU domain protein.
   
 
 0.463
ITGB3
Integrin beta; Belongs to the integrin beta chain family.
   
 0.461
PRDM14
PR/SET domain 14.
    
 
 0.456
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.