STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MARCHF3Membrane associated ring-CH-type finger 3. (300 aa)    
Predicted Functional Partners:
ANKRD9
Ankyrin repeat domain 9.
   
 
 0.709
MARCHF10
RING-CH-type domain-containing protein.
      
 0.679
MYO1G
Myosin IG; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.671
FLYWCH1
FLYWCH-type zinc finger 1.
      
 0.670
AHRR
Uncharacterized protein.
   
  
 0.632
MARCHF7
Membrane associated ring-CH-type finger 7.
      
 0.622
FBXO28
F-box protein 28.
   
    0.552
CNOT2
CCR4-NOT transcription complex subunit 2.
   
 
 0.551
SOX30
SRY-box 30.
      
 0.547
RFX4
Regulatory factor X4.
      
 0.547
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.