STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109497044Uncharacterized protein. (271 aa)    
Predicted Functional Partners:
MEAF6
MYST/Esa1 associated factor 6.
   
 0.727
MSL1
MSL complex subunit 1.
    
 
 0.697
TRRAP
Transformation/transcription domain associated protein; Belongs to the PI3/PI4-kinase family.
   
 0.656
ARID4B
AT-rich interaction domain 4B.
   
 0.646
ARID4A
AT-rich interaction domain 4A.
   
 0.646
MBD5
Methyl-CpG binding domain protein 5.
    
 0.641
DMAP1
DNA methyltransferase 1 associated protein 1.
   
 0.630
MRGBP
MRG domain binding protein.
    
 0.559
SMC2
Structural maintenance of chromosomes 2.
   
  
 0.519
EPC2
Enhancer of polycomb homolog.
   
 0.511
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.