UQCRB protein (Felis catus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

UQCRB

Ubiquinol-cytochrome c reductase binding protein. (137 aa)

Predicted Functional Partners:

UQCRC1

0.999

LOC101086703

0.999

UQCRC2

0.999

CYC1

0.999

UQCRQ

0.999

UQCRFS1

0.999

CYTB

0.999

LOC101095032

0.999

ENSFCAP00000057441

0.999

UQCR10

0.999

Your Current Organism:

Felis catus

NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CYC1	CYTB	ENSFCAP00000010720	ENSFCAP00000025721	Cytochrome c1.	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	0.999
CYC1	ENSFCAP00000057441	ENSFCAP00000010720	ENSFCAP00000057441	Cytochrome c1.	Uncharacterized protein.	0.999
CYC1	LOC101086703	ENSFCAP00000010720	ENSFCAP00000002411	Cytochrome c1.	Uncharacterized protein.	0.999
CYC1	LOC101095032	ENSFCAP00000010720	ENSFCAP00000050659	Cytochrome c1.	Cytochrome b-c1 complex subunit 6; This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This protein may mediate formation of the complex between cytochromes c and c1. Belongs to the UQCRH/QCR6 family.	0.999
CYC1	UQCR10	ENSFCAP00000010720	ENSFCAP00000061601	Cytochrome c1.	Ubiquinol-cytochrome c reductase, complex III subunit X.	0.999
CYC1	UQCRB	ENSFCAP00000010720	ENSFCAP00000060721	Cytochrome c1.	Ubiquinol-cytochrome c reductase binding protein.	0.999
CYC1	UQCRC1	ENSFCAP00000010720	ENSFCAP00000001942	Cytochrome c1.	Ubiquinol-cytochrome c reductase core protein 1.	0.999
CYC1	UQCRC2	ENSFCAP00000010720	ENSFCAP00000007194	Cytochrome c1.	Ubiquinol-cytochrome c reductase core protein 2; Belongs to the peptidase M16 family.	0.999
CYC1	UQCRFS1	ENSFCAP00000010720	ENSFCAP00000021684	Cytochrome c1.	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.999
CYC1	UQCRQ	ENSFCAP00000010720	ENSFCAP00000019967	Cytochrome c1.	Ubiquinol-cytochrome c reductase complex III subunit VII.	0.999
CYTB	CYC1	ENSFCAP00000025721	ENSFCAP00000010720	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	Cytochrome c1.	0.999
CYTB	ENSFCAP00000057441	ENSFCAP00000025721	ENSFCAP00000057441	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	Uncharacterized protein.	0.997
CYTB	LOC101086703	ENSFCAP00000025721	ENSFCAP00000002411	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	Uncharacterized protein.	0.999
CYTB	LOC101095032	ENSFCAP00000025721	ENSFCAP00000050659	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	Cytochrome b-c1 complex subunit 6; This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This protein may mediate formation of the complex between cytochromes c and c1. Belongs to the UQCRH/QCR6 family.	0.999
CYTB	UQCR10	ENSFCAP00000025721	ENSFCAP00000061601	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	Ubiquinol-cytochrome c reductase, complex III subunit X.	0.999
CYTB	UQCRB	ENSFCAP00000025721	ENSFCAP00000060721	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	Ubiquinol-cytochrome c reductase binding protein.	0.999
CYTB	UQCRC1	ENSFCAP00000025721	ENSFCAP00000001942	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	Ubiquinol-cytochrome c reductase core protein 1.	0.999
CYTB	UQCRC2	ENSFCAP00000025721	ENSFCAP00000007194	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	Ubiquinol-cytochrome c reductase core protein 2; Belongs to the peptidase M16 family.	0.999
CYTB	UQCRFS1	ENSFCAP00000025721	ENSFCAP00000021684	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.999
CYTB	UQCRQ	ENSFCAP00000025721	ENSFCAP00000019967	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	Ubiquinol-cytochrome c reductase complex III subunit VII.	0.999