STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSNL1Visinin like 1. (228 aa)    
Predicted Functional Partners:
MAPT
Microtubule-associated protein.
   
 
 0.705
CDK5R1
Cyclin-dependent kinase 5 activator.
   
  
 0.666
WDR82
WD repeat domain 82.
    
 
 0.654
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.649
PI4KB
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
    
 
 0.621
GEN1
GEN1 Holliday junction 5' flap endonuclease.
     
 0.602
RAD51AP2
RAD51 associated protein 2.
      
 0.602
PPARGC1A
PPARG coactivator 1 alpha.
   
  
 0.600
RTN1
Reticulon.
   
  
 0.593
MANF
Mesencephalic astrocyte derived neurotrophic factor.
     
 0.546
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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