Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATRIP | BARD1 | ENSFCAP00000048659 | ENSFCAP00000009574 | ATR interacting protein. | BRCA1 associated RING domain 1. | 0.724 |
ATRIP | BRCA1 | ENSFCAP00000048659 | ENSFCAP00000012193 | ATR interacting protein. | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | 0.859 |
ATRIP | BRIP1 | ENSFCAP00000048659 | ENSFCAP00000015577 | ATR interacting protein. | BRCA1 interacting protein C-terminal helicase 1. | 0.506 |
ATRIP | CDC45 | ENSFCAP00000048659 | ENSFCAP00000036937 | ATR interacting protein. | Cell division cycle 45. | 0.848 |
ATRIP | CLSPN | ENSFCAP00000048659 | ENSFCAP00000027383 | ATR interacting protein. | Claspin. | 0.934 |
ATRIP | MCM5 | ENSFCAP00000048659 | ENSFCAP00000012838 | ATR interacting protein. | Minichromosome maintenance complex component 5; Belongs to the MCM family. | 0.652 |
ATRIP | RAD9B | ENSFCAP00000048659 | ENSFCAP00000003814 | ATR interacting protein. | RAD9 checkpoint clamp component B. | 0.670 |
ATRIP | RHNO1 | ENSFCAP00000048659 | ENSFCAP00000024042 | ATR interacting protein. | RAD9-HUS1-RAD1 interacting nuclear orphan 1. | 0.745 |
ATRIP | TOPBP1 | ENSFCAP00000048659 | ENSFCAP00000061271 | ATR interacting protein. | DNA topoisomerase II binding protein 1. | 0.979 |
BARD1 | ATRIP | ENSFCAP00000009574 | ENSFCAP00000048659 | BRCA1 associated RING domain 1. | ATR interacting protein. | 0.724 |
BARD1 | BRCA1 | ENSFCAP00000009574 | ENSFCAP00000012193 | BRCA1 associated RING domain 1. | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | 0.999 |
BARD1 | BRIP1 | ENSFCAP00000009574 | ENSFCAP00000015577 | BRCA1 associated RING domain 1. | BRCA1 interacting protein C-terminal helicase 1. | 0.926 |
BARD1 | CLSPN | ENSFCAP00000009574 | ENSFCAP00000027383 | BRCA1 associated RING domain 1. | Claspin. | 0.703 |
BARD1 | RAD9B | ENSFCAP00000009574 | ENSFCAP00000003814 | BRCA1 associated RING domain 1. | RAD9 checkpoint clamp component B. | 0.665 |
BARD1 | RHNO1 | ENSFCAP00000009574 | ENSFCAP00000024042 | BRCA1 associated RING domain 1. | RAD9-HUS1-RAD1 interacting nuclear orphan 1. | 0.603 |
BARD1 | TOPBP1 | ENSFCAP00000009574 | ENSFCAP00000061271 | BRCA1 associated RING domain 1. | DNA topoisomerase II binding protein 1. | 0.989 |
BARD1 | TP53BP1 | ENSFCAP00000009574 | ENSFCAP00000019469 | BRCA1 associated RING domain 1. | Tumor protein p53 binding protein 1. | 0.832 |
BRCA1 | ATRIP | ENSFCAP00000012193 | ENSFCAP00000048659 | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | ATR interacting protein. | 0.859 |
BRCA1 | BARD1 | ENSFCAP00000012193 | ENSFCAP00000009574 | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | BRCA1 associated RING domain 1. | 0.999 |
BRCA1 | BRIP1 | ENSFCAP00000012193 | ENSFCAP00000015577 | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | BRCA1 interacting protein C-terminal helicase 1. | 0.987 |
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