STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGBL1ATP/GTP binding protein like 1. (1078 aa)    
Predicted Functional Partners:
SLC4A11
Solute carrier family 4 member 11.
   
  
 0.905
LOXHD1
Lipoxygenase homology domains 1.
     
 0.850
KANK4
KN motif and ankyrin repeat domains 4.
    
 
 0.780
COL8A2
Collagen type VIII alpha 2 chain.
      
 0.674
BORA
BORA aurora kinase A activator.
   
  
 0.617
NFXL1
Nuclear transcription factor, X-box binding like 1.
      
 0.617
ERAL1
Era like 12S mitochondrial rRNA chaperone 1.
   
 
 0.591
PIBF1
Progesterone immunomodulatory binding factor 1.
   
 
 0.557
RIBC1
RIB43A domain with coiled-coils 1.
      
 0.549
SLC12A8
Solute carrier family 12 member 8.
    
 
 0.530
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.