Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COX1 | COX2 | ENSPPRP00000000003 | ENSPPRP00000000004 | Cytochrome c oxidase subunit 1. | Cytochrome c oxidase subunit II. | 0.999 |
COX1 | COX3 | ENSPPRP00000000003 | ENSPPRP00000000007 | Cytochrome c oxidase subunit 1. | Cytochrome c oxidase subunit III. | 0.999 |
COX1 | CYTB | ENSPPRP00000000003 | ENSPPRP00000000013 | Cytochrome c oxidase subunit 1. | Ubiquinol-cytochrome c reductase cytochrome b subunit. | 0.999 |
COX1 | ND2 | ENSPPRP00000000003 | ENSPPRP00000000002 | Cytochrome c oxidase subunit 1. | NADH-ubiquinone oxidoreductase chain 2. | 0.999 |
COX1 | ND3 | ENSPPRP00000000003 | ENSPPRP00000000008 | Cytochrome c oxidase subunit 1. | NADH-ubiquinone oxidoreductase chain 3. | 0.998 |
COX1 | ND4 | ENSPPRP00000000003 | ENSPPRP00000000010 | Cytochrome c oxidase subunit 1. | NADH-ubiquinone oxidoreductase chain 4. | 0.999 |
COX1 | ND4L | ENSPPRP00000000003 | ENSPPRP00000000009 | Cytochrome c oxidase subunit 1. | NADH-ubiquinone oxidoreductase chain 4L. | 0.935 |
COX1 | ND5 | ENSPPRP00000000003 | ENSPPRP00000000011 | Cytochrome c oxidase subunit 1. | NADH-ubiquinone oxidoreductase chain 5. | 0.999 |
COX1 | ND6 | ENSPPRP00000000003 | ENSPPRP00000000012 | Cytochrome c oxidase subunit 1. | NADH-ubiquinone oxidoreductase chain 6. | 0.994 |
COX1 | NDUFS3 | ENSPPRP00000000003 | ENSPPRP00000002231 | Cytochrome c oxidase subunit 1. | NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial. | 0.998 |
COX2 | COX1 | ENSPPRP00000000004 | ENSPPRP00000000003 | Cytochrome c oxidase subunit II. | Cytochrome c oxidase subunit 1. | 0.999 |
COX2 | COX3 | ENSPPRP00000000004 | ENSPPRP00000000007 | Cytochrome c oxidase subunit II. | Cytochrome c oxidase subunit III. | 0.999 |
COX2 | CYTB | ENSPPRP00000000004 | ENSPPRP00000000013 | Cytochrome c oxidase subunit II. | Ubiquinol-cytochrome c reductase cytochrome b subunit. | 0.999 |
COX2 | ND2 | ENSPPRP00000000004 | ENSPPRP00000000002 | Cytochrome c oxidase subunit II. | NADH-ubiquinone oxidoreductase chain 2. | 0.999 |
COX2 | ND3 | ENSPPRP00000000004 | ENSPPRP00000000008 | Cytochrome c oxidase subunit II. | NADH-ubiquinone oxidoreductase chain 3. | 0.999 |
COX2 | ND4 | ENSPPRP00000000004 | ENSPPRP00000000010 | Cytochrome c oxidase subunit II. | NADH-ubiquinone oxidoreductase chain 4. | 0.999 |
COX2 | ND4L | ENSPPRP00000000004 | ENSPPRP00000000009 | Cytochrome c oxidase subunit II. | NADH-ubiquinone oxidoreductase chain 4L. | 0.939 |
COX2 | ND5 | ENSPPRP00000000004 | ENSPPRP00000000011 | Cytochrome c oxidase subunit II. | NADH-ubiquinone oxidoreductase chain 5. | 0.999 |
COX2 | ND6 | ENSPPRP00000000004 | ENSPPRP00000000012 | Cytochrome c oxidase subunit II. | NADH-ubiquinone oxidoreductase chain 6. | 0.993 |
COX2 | NDUFS3 | ENSPPRP00000000004 | ENSPPRP00000002231 | Cytochrome c oxidase subunit II. | NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial. | 0.998 |
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