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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD42Ankyrin repeat domain 42. (516 aa)    
Predicted Functional Partners:
IQUB
IQ and ubiquitin-like domain-containing protein isoform X1.
   
 
 0.788
DNAAF1
Dynein axonemal assembly factor 1.
   
  0.782
CCDC90B
Coiled-coil domain-containing protein 90B, mitochondrial isoform X1.
      
 0.782
NOB1
RNA-binding protein NOB1.
   
 
 0.767
RAB30
Ras-related protein Rab-30.
      
 0.707
BOLA1
BolA-like protein 1 isoform X1.
      
 0.632
PCF11
PCF11 cleavage and polyadenylation factor subunit.
    
 
 0.623
HSDL2
Hydroxysteroid dehydrogenase-like protein 2.
    
 0.552
DNAI1
Dynein intermediate chain 1, axonemal isoform X1.
     
 0.476
CBFA2T2
CBFA2/RUNX1 translocation partner 2.
    
 0.464
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.