Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C3orf62Uncharacterized protein C3orf62 homolog isoform X1. (270 aa)    
Predicted Functional Partners:
EP300
Histone acetyltransferase p300.
    
   0.596
CREBBP
LOW QUALITY PROTEIN: CREB-binding protein.
    
 
 0.549
CCDC36
Coiled-coil domain-containing protein 36.
      
 0.495
C16orf90
Uncharacterized protein C16orf90 homolog isoform X1.
  
   
 0.423
TSEN34
tRNA splicing endonuclease subunit 34.
      
 0.423
MANSC1
MANSC domain-containing protein 1 isoform X1.
      
 0.414
LOC109253013
Transcription factor Spi-B isoform X1.
  
     0.411
SEZ6L
Seizure 6-like protein.
      
 0.409
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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