Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL4339S ribosomal protein L43, mitochondrial. (262 aa)    
Predicted Functional Partners:
MRPL49
39S ribosomal protein L49, mitochondrial.
   
 
 0.975
MRPS10
28S ribosomal protein S10, mitochondrial isoform X1.
   
 
 0.967
MRPL44
39S ribosomal protein L44, mitochondrial.
   
 
 0.960
MRPL13
39S ribosomal protein L13, mitochondrial.
   
 
 0.947
MRPL20
39S ribosomal protein L20, mitochondrial.
   
 
 0.947
MRPL47
39S ribosomal protein L47, mitochondrial isoform X1.
   
 
 0.942
MRPL55
39S ribosomal protein L55, mitochondrial isoform X1.
   
 
 0.930
MRPL10
39S ribosomal protein L10, mitochondrial isoform X1.
   
 
 0.927
MRPS16
28S ribosomal protein S16, mitochondrial isoform X1.
   
 
 0.925
MRPS25
28S ribosomal protein S25, mitochondrial.
   
 
 0.918
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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