Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C4orf47UPF0602 protein C4orf47 homolog. (307 aa)    
Predicted Functional Partners:
C9orf116
UPF0691 protein C9orf116 homolog.
    
 
 0.941
EFCAB1
EF-hand calcium-binding domain-containing protein 1.
    
 
 0.921
IQUB
IQ and ubiquitin-like domain-containing protein isoform X1.
   
 
 0.901
C5orf49
Uncharacterized protein C5orf49 homolog.
   
 
 0.890
CCDC96
Coiled-coil domain-containing protein 96.
    
 0.852
ARMC3
Armadillo repeat-containing protein 3 isoform X1.
    
 
 0.850
ENKUR
Enkurin.
   
 
 0.844
C1orf194
Uncharacterized protein C1orf194 homolog.
  
 
   0.804
EFHB
EF-hand domain-containing family member B.
   
   0.800
CCDC173
Coiled-coil domain-containing protein 173.
   
  0.798
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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