Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC109249533Class I histocompatibility antigen, Gogo-B*0101 alpha chain-like isoform X1. (365 aa)    
Predicted Functional Partners:
B2M
Beta-2-microglobulin.
   
 0.755
KLRD1
Killer cell lectin-like receptor subfamily D member 1.
    
 0.621
RPA2
Replication protein A 32 kDa subunit.
   
 0.600
HLA-DRA
HLA class II histocompatibility antigen, DR alpha chain.
   
 
 0.569
TAPBP
TAP binding protein (tapasin).
   
 0.565
KLRG1
Killer cell lectin-like receptor subfamily G member 1 isoform X1.
    
 0.529
HLA-DMA
HLA class II histocompatibility antigen, DM alpha chain.
   
 
 0.528
HLA-DOA
HLA class II histocompatibility antigen, DO alpha chain-like.
   
 
 0.510
CALR
Calreticulin.
    
 0.505
LOC109252944
T-cell surface glycoprotein CD8 alpha chain-like.
    
 0.488
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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