| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| COQ2 | COQ3 | ENSPPRP00000013395 | ENSPPRP00000006346 | 4-hydroxybenzoate polyprenyltransferase, mitochondrial isoform X1. | Polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase. | 0.883 |
| COQ2 | COQ4 | ENSPPRP00000013395 | ENSPPRP00000013953 | 4-hydroxybenzoate polyprenyltransferase, mitochondrial isoform X1. | Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform X1. | 0.738 |
| COQ2 | COQ5 | ENSPPRP00000013395 | ENSPPRP00000008614 | 4-hydroxybenzoate polyprenyltransferase, mitochondrial isoform X1. | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial. | 0.875 |
| COQ2 | COQ6 | ENSPPRP00000013395 | ENSPPRP00000000077 | 4-hydroxybenzoate polyprenyltransferase, mitochondrial isoform X1. | Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial. | 0.980 |
| COQ2 | COQ7 | ENSPPRP00000013395 | ENSPPRP00000001428 | 4-hydroxybenzoate polyprenyltransferase, mitochondrial isoform X1. | 5-demethoxyubiquinone hydroxylase, mitochondrial. | 0.714 |
| COQ2 | COQ8A | ENSPPRP00000013395 | ENSPPRP00000003176 | 4-hydroxybenzoate polyprenyltransferase, mitochondrial isoform X1. | Coenzyme Q8A. | 0.748 |
| COQ2 | COQ8B | ENSPPRP00000013395 | ENSPPRP00000004560 | 4-hydroxybenzoate polyprenyltransferase, mitochondrial isoform X1. | Atypical kinase COQ8B, mitochondrial isoform X1. | 0.602 |
| COQ2 | COQ9 | ENSPPRP00000013395 | ENSPPRP00000008242 | 4-hydroxybenzoate polyprenyltransferase, mitochondrial isoform X1. | Ubiquinone biosynthesis protein COQ9, mitochondrial. | 0.747 |
| COQ2 | PDSS1 | ENSPPRP00000013395 | ENSPPRP00000006872 | 4-hydroxybenzoate polyprenyltransferase, mitochondrial isoform X1. | Decaprenyl-diphosphate synthase subunit 1 isoform X1. | 0.959 |
| COQ2 | PDSS2 | ENSPPRP00000013395 | ENSPPRP00000011592 | 4-hydroxybenzoate polyprenyltransferase, mitochondrial isoform X1. | Decaprenyl-diphosphate synthase subunit 2. | 0.958 |
| COQ3 | COQ2 | ENSPPRP00000006346 | ENSPPRP00000013395 | Polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase. | 4-hydroxybenzoate polyprenyltransferase, mitochondrial isoform X1. | 0.883 |
| COQ3 | COQ4 | ENSPPRP00000006346 | ENSPPRP00000013953 | Polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase. | Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform X1. | 0.990 |
| COQ3 | COQ5 | ENSPPRP00000006346 | ENSPPRP00000008614 | Polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase. | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial. | 0.989 |
| COQ3 | COQ6 | ENSPPRP00000006346 | ENSPPRP00000000077 | Polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase. | Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial. | 0.998 |
| COQ3 | COQ7 | ENSPPRP00000006346 | ENSPPRP00000001428 | Polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase. | 5-demethoxyubiquinone hydroxylase, mitochondrial. | 0.987 |
| COQ3 | COQ8A | ENSPPRP00000006346 | ENSPPRP00000003176 | Polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase. | Coenzyme Q8A. | 0.902 |
| COQ3 | COQ8B | ENSPPRP00000006346 | ENSPPRP00000004560 | Polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase. | Atypical kinase COQ8B, mitochondrial isoform X1. | 0.894 |
| COQ3 | COQ9 | ENSPPRP00000006346 | ENSPPRP00000008242 | Polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase. | Ubiquinone biosynthesis protein COQ9, mitochondrial. | 0.966 |
| COQ3 | PDSS1 | ENSPPRP00000006346 | ENSPPRP00000006872 | Polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase. | Decaprenyl-diphosphate synthase subunit 1 isoform X1. | 0.775 |
| COQ3 | PDSS2 | ENSPPRP00000006346 | ENSPPRP00000011592 | Polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase. | Decaprenyl-diphosphate synthase subunit 2. | 0.778 |