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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXI1Forkhead box protein I1. (378 aa)    
Predicted Functional Partners:
ATP6V1B1
V-type proton ATPase subunit B, kidney isoform.
   
  
 0.844
ATP6V0A4
V-type H+-transporting ATPase subunit a.
   
  
 0.743
SLC26A4
Solute carrier family 26 (sodium-independent chloride/iodide transporter), member 4.
   
  
 0.725
CCDC153
Coiled-coil domain-containing protein 153 isoform X1.
      
 0.687
ALX1
Cartilage homeoprotein 1.
   
 0.634
ASCL3
Achaete-scute complex protein.
    
 
 0.623
BARX1
Homeobox protein BarH-like 1.
    
 0.620
CCDC113
Coiled-coil domain containing 113.
      
 0.582
LRIG3
Leucine-rich repeats and immunoglobulin-like domains protein 3 isoform X1.
     
 0.557
SIX3
Homeobox protein SIX3 isoform X1.
      
 0.537
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.