STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA18Mitochondria-eating protein isoform X1. (542 aa)    
Predicted Functional Partners:
SPATA20
Spermatogenesis-associated protein 20 isoform X1.
      
 0.746
CCIN
Calicin.
   
  
 0.663
RSPH14
Radial spoke head 14 homolog.
   
  
 0.657
SYT13
Synaptotagmin-13.
      
 0.630
LRRC23
Leucine-rich repeat-containing protein 23.
   
  
 0.607
RRAD
Ras-related associated with diabetes.
      
 0.603
SPATA45
Spermatogenesis-associated protein 45.
      
 0.598
SPPL2B
Signal peptide peptidase-like 2B isoform X1.
      
 0.598
TSPAN8
Tetraspanin-8.
      
 0.598
SHISA6
Protein shisa-6 homolog.
      
 0.592
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.