Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMAD9Mothers against decapentaplegic homolog 9 isoform X1. (469 aa)    
Predicted Functional Partners:
SMAD4
Mothers against decapentaplegic homolog 4 isoform X1.
   
0.985
SMAD5
Mothers against decapentaplegic homolog 5.
  
0.979
SMAD1
Mothers against decapentaplegic homolog 1.
  
0.976
LEMD3
Inner nuclear membrane protein Man1.
    
 0.951
SMAD6
Mothers against decapentaplegic homolog 6.
    
0.928
SMAD7
Mothers against decapentaplegic homolog 7 isoform X1.
    
0.927
SMAD2
Mothers against decapentaplegic homolog 2 isoform X1.
  
0.915
SMAD3
Mothers against decapentaplegic homolog 3 isoform X1.
  
0.915
BMPR1B
Bone morphogenetic protein receptor type-1B isoform X1.
   
 0.907
BMPR1A
Bone morphogenetic protein receptor type-1A.
   
 0.907
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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