STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRMT1LTRMT1-like protein isoform X1. (726 aa)    
Predicted Functional Partners:
SWT1
Transcriptional protein SWT1 isoform X1.
   
  
 0.806
TPK1
Thiamin pyrophosphokinase 1 isoform X1.
      
 0.793
SLC6A5
Solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9.
      
 0.781
FTCD
Glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase.
      
 0.778
BBOX1
Gamma-butyrobetaine dioxygenase.
      
 0.775
IVNS1ABP
Influenza virus NS1A-binding protein.
   
  
 0.753
NOP2
Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase.
   
 
 0.662
DIMT1
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase.
   
  
 0.634
DAND5
DAN domain family member 5.
      
 0.619
RNF2
E3 ubiquitin-protein ligase RNF1/2.
      
 0.612
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.