Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB33ARas-related protein Rab-33A isoform X1. (237 aa)    
Predicted Functional Partners:
RAB33B
Ras-related protein Rab-33B.
   
  0.958
ATG16L1
Autophagy-related protein 16-1 isoform X1.
    
 0.905
TBC1D25
TBC1 domain family member 25 isoform X1.
     
 0.880
ATG16L2
Autophagy-related protein 16-2 isoform X1.
    
 0.793
ATG12
Ubiquitin-like protein ATG12.
    
 
 0.786
RIC1
RAB6A-GEF complex partner protein 1 isoform X1.
    
 0.772
RABGGTB
LOW QUALITY PROTEIN: geranylgeranyl transferase type-2 subunit beta.
    
 0.754
ATG5
Autophagy protein 5 isoform X1.
   
 
 0.738
CHM
Rab proteins geranylgeranyltransferase component A 1.
    
 0.691
USO1
General vesicular transport factor p115 isoform X1.
   
 0.659
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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