Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPANPeter pan homolog. (461 aa)    
Predicted Functional Partners:
BOP1
BOP1 ribosomal biogenesis factor.
   
 0.949
RPF1
Ribosome production factor 1.
   
 0.948
EBNA1BP2
Probable rRNA-processing protein EBP2 isoform X1.
   
 0.944
RRS1
Ribosome biogenesis regulatory protein homolog.
   
 0.944
RRP15
RRP15-like protein.
   
 0.941
NOC2L
Nucleolar complex protein 2 homolog isoform X1.
   
 0.938
MAK16
Protein MAK16 homolog.
   
 0.931
MRTO4
MRNA turnover protein 4 homolog.
   
 0.929
WDR74
Ribosome biogenesis protein NSA1.
   
 0.928
PES1
Pescadillo homolog isoform X1.
   
 0.926
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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