Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACOD1Cis-aconitate decarboxylase isoform X1. (479 aa)    
Predicted Functional Partners:
EPHX2
Epoxide hydrolase 2.
  
 0.672
ELP6
Elongator complex protein 6 isoform X1.
    
 
 0.671
ELP4
Elongator complex protein 4 isoform X1.
    
   0.659
AGXT
Alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase.
  
 
 0.630
AGXT2
Alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase.
  
 
 0.599
GLDC
Glycine dehydrogenase (decarboxylating), mitochondrial isoform X1.
   
 
 0.591
LOC109276857
Probable low-specificity L-threonine aldolase 2.
    
 0.591
GCAT
2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial-like.
  
 
 0.579
AMT
Aminomethyltransferase, mitochondrial.
  
 0.578
TRMU
Mitochondrial tRNA-specific 2-thiouridylase 1 isoform X1.
   
 
 0.576
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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