Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
YARS1Tyrosine--tRNA ligase, cytoplasmic isoform X1. (528 aa)    
Predicted Functional Partners:
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X1.
  
 0.998
MARS1
Methionine--tRNA ligase, cytoplasmic isoform X1.
 
 0.994
LARS1
Leucine--tRNA ligase, cytoplasmic isoform X1.
  
 0.983
QARS1
Glutaminyl-tRNA synthetase.
  
 0.983
VARS1
Valine--tRNA ligase isoform X1.
  
 0.982
KARS1
Lysyl-tRNA synthetase, class II.
  
 0.978
RARS1
Arginine--tRNA ligase, cytoplasmic.
  
 0.973
DARS1
Aspartate--tRNA ligase, cytoplasmic isoform X1.
  
 0.969
LARS2
leucyl-tRNA synthetase 2, mitochondrial.
  
 0.966
YARS2
Tyrosine--tRNA ligase, mitochondrial.
  
 0.965
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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