STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LONRF3LON peptidase N-terminal domain and RING finger protein 3-like isoform X1. (498 aa)    
Predicted Functional Partners:
PNMA3
Paraneoplastic antigen Ma3.
   
  
 0.552
TP53BP1
Tumor suppressor p53-binding protein 1 isoform X1.
    
 0.550
UBC
Polyubiquitin-C.
    
 0.489
PDZRN4
PDZ domain-containing RING finger protein 4 isoform X1.
      
 0.441
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
   
  0.437
LOC109255456
Ubiquitin-small subunit ribosomal protein S27Ae.
   
  0.437
RAD50
DNA repair protein RAD50 isoform X1.
   
 0.430
NME8
Thioredoxin domain-containing protein 3 isoform X1.
   
 
 0.421
PRODH2
Probable proline dehydrogenase 2 isoform X1.
      
 0.419
FAM171B
Protein FAM171B.
   
  
 0.416
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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