STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH15Cadherin 15, M-cadherin. (779 aa)    
Predicted Functional Partners:
TM6SF1
Transmembrane 6 superfamily member 1 isoform X1.
   
  
 0.796
CTNNB1
Catenin beta 1.
   
 0.785
CTNND1
Catenin (cadherin-associated protein), delta 1.
    
 0.779
JUP
Junction plakoglobin.
   
 0.750
TMEM182
Transmembrane protein 182 isoform X1.
      
 0.700
ARVCF
Armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X1.
    
 0.649
CDON
Cell adhesion molecule-related/down-regulated by oncogenes.
   
 0.612
BOC
Brother of CDO isoform X1.
   
 0.609
MYOG
Myogenic factor 4 (myogenin).
   
 
 0.589
SPAG9
C-Jun-amino-terminal kinase-interacting protein 4 isoform X1.
     
 0.574
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.