STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109253687LOW QUALITY PROTEIN: COUP transcription factor 2-like. (401 aa)    
Predicted Functional Partners:
POLR2B
DNA-directed RNA polymerase II subunit RPB2.
    
 0.593
NCOR2
Nuclear receptor corepressor 2.
    
 0.524
PAX7
Paired box 7.
    
 
 0.523
TOMM40
Mitochondrial import receptor subunit TOM40 homolog isoform X1.
    
 
 0.513
NCOR1
Nuclear receptor corepressor 1 isoform X1.
    
 0.504
ENSPPRP00000017491
annotation not available
   
 0.465
ATF1
Activating transcription factor 1.
   
 0.465
POLR3A
DNA-directed RNA polymerase III subunit RPC1 isoform X1.
   
 
 0.460
AUTS2
Autism susceptibility gene 2 protein.
    
 
 0.450
MED1
Mediator of RNA polymerase II transcription subunit 1 isoform X1.
    
 0.442
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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