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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXD3Homeobox protein HoxA/B/D3. (432 aa)    
Predicted Functional Partners:
HOXD4
Homeobox protein HoxA/B/C/D4.
  
  
0.899
HOXA6
Homeobox protein Hox-A6 isoform X1.
   
  
0.572
COA7
Cytochrome c oxidase assembly factor 7.
    
 
 0.515
ARHGAP45
LOW QUALITY PROTEIN: minor histocompatibility protein HA-1.
      
 0.512
HOXD9
Homeobox protein HoxB/C/D9.
   
 
0.433
HOXB7
Homeobox protein HoxA/B7.
   
  
0.432
ZIC4
Zinc finger protein ZIC 4 isoform X1.
    
 0.430
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.