STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCL1RNA 3'-terminal phosphate cyclase-like protein isoform X1. (371 aa)    
Predicted Functional Partners:
BMS1
Ribosome biogenesis protein BMS1 homolog isoform X1.
   
 0.999
UTP4
UTP4 small subunit processome component.
   
 0.997
WDR43
WD repeat domain 43.
   
 0.996
UTP18
U3 small nucleolar RNA-associated protein 18 homolog isoform X1.
   
 0.995
BYSL
Essential nuclear protein 1.
   
 
 0.995
UTP15
U3 small nucleolar RNA-associated protein 15 homolog.
   
 0.993
WDR36
U3 small nucleolar RNA-associated protein 21.
   
 
 0.993
HEATR1
U3 small nucleolar RNA-associated protein 10.
   
 0.993
NOC4L
U3 small nucleolar RNA-associated protein 19.
   
 
 0.993
PWP2
Periodic tryptophan protein 2 homolog isoform X1.
   
 
 0.992
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.