STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMARCC1SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C. (1040 aa)    
Predicted Functional Partners:
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
   
 0.995
PBRM1
Protein polybromo-1 isoform X1.
   
 0.987
SMARCD1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D.
    
 0.985
ARID1A
AT-rich interactive domain-containing protein 1A.
   
 0.981
SMARCA4
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4.
   
 0.980
SMARCA2
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4.
   
 0.980
SMARCD2
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D.
    
 0.970
ARID1B
AT-rich interactive domain-containing protein 1B isoform X1.
   
 0.970
ARID2
AT-rich interactive domain-containing protein 2 isoform X1.
   
 0.963
PHF10
PHD finger protein 10 isoform X1.
    
 0.961
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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