STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GABREGamma-aminobutyric acid receptor subunit epsilon. (493 aa)    
Predicted Functional Partners:
TRAK2
Trafficking kinesin-binding protein 2.
     
 0.908
PLCL1
Inactive phospholipase C-like protein 1 isoform X1.
     
 0.903
NSF
Vesicle-fusing ATPase.
    
 0.900
TMEM200A
Transmembrane protein 200A.
      
 0.740
GABARAP
Gamma-aminobutyric acid receptor-associated protein.
    
  0.725
GABARAPL1
Gamma-aminobutyric acid receptor-associated protein-like 1.
    
  0.725
ZDHHC3
Zinc finger DHHC-type containing 3.
      
 0.724
TMTC2
Transmembrane and TPR repeat-containing protein 2 isoform X1.
      
 0.709
TMTC1
Transmembrane and TPR repeat-containing protein 1.
      
 0.704
SEBOX
Homeobox protein SEBOX.
      
 0.693
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.