Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYT7Synaptotagmin-7. (687 aa)    
Predicted Functional Partners:
RAB3A
Ras-related protein Rab-3A.
   
 0.662
CPLX1
Complexin-1/2.
   
 0.647
SNAP25
Synaptosomal-associated protein 25 isoform X1.
   
 0.601
RAB3B
Ras-related protein Rab-3B.
   
 0.562
RAB3C
Ras-related protein Rab-3C isoform X1.
   
 0.562
VAMP2
Vesicle-associated membrane protein 2.
    
 0.557
RAB3D
Ras-related protein Rab-3D isoform X1.
   
 0.534
SNAP23
Synaptosomal-associated protein 23 isoform X1.
   
 0.521
SLC32A1
Solute carrier family 32 (vesicular inhibitory amino acid transporter).
   
 
 0.507
SYN2
Synapsin-2 isoform X1.
   
 0.502
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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