STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNTN6LOW QUALITY PROTEIN: contactin-6. (1028 aa)    
Predicted Functional Partners:
PTPRG
Receptor-type tyrosine-protein phosphatase gamma isoform X1.
    
 0.840
CHL1
Neural cell adhesion molecule L1-like protein isoform X1.
    
0.655
NRCAM
Neuronal cell adhesion molecule isoform X1.
    
0.655
SYT10
Synaptotagmin-10 isoform X1.
   
  
 0.627
L1CAM
Neural cell adhesion molecule L1 isoform X1.
    
0.613
VPS53
Vacuolar protein sorting-associated protein 53 homolog.
      
 0.609
PPIP5K1
Diphosphoinositol pentakisphosphate kinase 1.
      
 0.605
APP
Amyloid beta A4 protein isoform X1.
   
 
 0.600
AFAP1L1
Actin filament-associated protein 1-like 1 isoform X1.
      
 0.597
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
 0.596
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.