STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGM6Protein-glutamine gamma-glutamyltransferase 6. (706 aa)    
Predicted Functional Partners:
PRRT2
Proline rich transmembrane protein 2.
      
 0.767
ATXN10
Ataxin-10.
   
  
 0.743
ATN1
Atrophin 1.
      
 0.737
ATXN7
Ataxin-7 isoform X1.
      
 0.726
PPP2R2B
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1.
      
 0.701
ATXN1
Ataxin 1.
   
  
 0.623
CACNA1A
Voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X1.
      
 0.598
MLN
Promotilin.
     
 0.554
SACS
Sacsin isoform X1.
      
 0.518
DDRGK1
DDRGK domain-containing protein 1.
      
 0.517
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.