STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VCPTransitional endoplasmic reticulum ATPase isoform X1. (790 aa)    
Predicted Functional Partners:
NPLOC4
Nuclear protein localization protein 4 homolog.
   
 0.999
NSFL1C
UBX domain-containing protein 1.
   
 0.998
UBXN7
UBX domain-containing protein 7.
   
 0.997
UBXN1
UBX domain-containing protein 1/4.
   
 0.996
UBXN6
UBX domain-containing protein 6 isoform X1.
    
 0.996
UBXN4
UBX domain-containing protein 1/4.
   
 0.995
UFD1
Ubiquitin fusion degradation protein 1 homolog.
    
 0.995
UBXN2A
UBX domain-containing protein 2A.
   
 0.995
VCPKMT
Protein-lysine methyltransferase METTL21D isoform X1.
   
 0.985
FAF1
FAS-associated factor 1 isoform X1.
   
 0.985
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.