STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNAPC1SnRNA-activating protein complex subunit 1 isoform X1. (375 aa)    
Predicted Functional Partners:
SNAPC3
SnRNA-activating protein complex subunit 3.
   
 0.998
SNAPC5
SnRNA-activating protein complex subunit 5 isoform X1.
    
 0.993
SNAPC2
SnRNA-activating protein complex subunit 2-like isoform X1.
    
 0.969
GTF2B
Transcription initiation factor TFIIB.
    
 0.914
TBP
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.820
TBPL2
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.820
GTF2A1
Transcription initiation factor TFIIA large subunit.
    
  0.776
ENSPPRP00000011311
annotation not available
    
  0.736
GTF2A2
Transcription initiation factor TFIIA small subunit.
    
  0.736
MFF
Mitochondrial fission factor isoform X1.
      
 0.716
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.