STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUNH16orf52Uncharacterized protein C16orf52 homolog. (89 aa)    
Predicted Functional Partners:
SMO
Smoothened homolog isoform X1.
     
 0.919
MEGF8
Multipile epidermal growth factor-like domains protein 8.
      
 0.739
RNF157
RING finger protein 157 isoform X1.
      
 0.612
VWA3A
Von Willebrand factor A domain-containing protein 3A isoform X1.
      
 0.612
CLDN19
Claudin-19.
      
 0.608
FAM20B
Glycosaminoglycan xylosylkinase.
      
 0.575
LHFPL4
Lipoma HMGIC fusion partner-like 4 protein isoform X1.
      
 0.559
LHFPL3
Lipoma HMGIC fusion partner-like 3 protein isoform X1.
      
 0.559
ATRNL1
Attractin-like protein 1 isoform X1.
      
 0.518
POLR3E
RNA polymerase III subunit E.
      
 0.515
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.