STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NXF1Nuclear RNA export factor 1. (618 aa)    
Predicted Functional Partners:
ALYREF
THO complex subunit 4.
    
 0.997
NXT1
NTF2-related export protein 1/2.
    
 0.995
RAE1
MRNA export factor isoform X1.
    
 0.991
NXT2
NTF2-related export protein 2 isoform X1.
    
 0.980
UPF3A
Regulator of nonsense transcripts 3A.
    
 0.965
NUP42
Nucleoporin-like protein 2.
    
 0.961
UPF3B
Regulator of nonsense transcripts 3B isoform X1.
    
 0.958
SRSF1
Serine/arginine-rich splicing factor 1 isoform X1.
   
 0.957
EIF4A3
Eukaryotic initiation factor 4A-III.
   
 0.955
THOC5
THO complex subunit 5 homolog isoform X1.
    
 0.954
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.