STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDK13Cyclin-dependent kinase 13 isoform X1. (1517 aa)    
Predicted Functional Partners:
CCNK
Cyclin K.
   
 0.996
POLR2A
LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1.
   
 0.912
SUPT5H
Transcription elongation factor SPT5 isoform X1.
    
 0.875
CCNT1
Cyclin-T1.
   
 0.826
CCNT2
Cyclin-T2 isoform X1.
   
 0.808
C6orf15
Corneodesmosin.
    
 0.797
CCNQ
Cyclin-related protein FAM58A isoform X1.
   
 0.761
NELFE
Negative elongation factor E.
    
 0.737
CCNH
Cyclin-H isoform X1.
    
 0.733
LEO1
RNA polymerase-associated protein LEO1 isoform X1.
    
 0.730
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.